PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UM5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	10	KASGYTFTGYYMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	19	WINPNSGGTN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	20	H3-20-*	-1	ARGGWISLYYdssgypNFDY
C	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	11	RDTSISTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L1	14	L1-14-2	20	TGTSSDVGSyNLVS	BBBAAAAAABABBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L2	8	L2-8-*	-1	YEVSKRPS	BLAABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	88.9	L3	10	L3-10-2	14	CSYAGSSTVI	BBBAELLBBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	10	KASGYTFTGYYMH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	19	WINPNSGGTN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	20	H3-20-*	-1	ARGGWISLYYdssgypNFDY
G	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	11	RDTSISTA	BBAAALBB
H	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L1	14	L1-14-2	20	TGTSSDVGSyNLVS	BBBAAAAAABABBB
H	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L2	8	L2-8-*	-1	YEVSKRPS	BLAABBBB
H	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	88.9	L3	10	L3-10-2	14	CSYAGSSTVI	BBBAELLBBB
H	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H1	13	H1-13-1	10	KASGYTFTGYYMH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H2	10	H2-10-1	19	WINPNSGGTN	BBBAAALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H3	20	H3-20-*	-1	ARGGWISLYYdssgypNFDY
K	heavy	Homo.sapiens	Hu_IGHV1-2*02	100.0	Hu_IGHV1-2*02	100.0	H4	8	H4-8-1	11	RDTSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L1	14	L1-14-2	20	TGTSSDVGSyNLVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L2	8	L2-8-*	-1	YEVSKRPS	BLAABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	88.9	L3	10	L3-10-2	14	CSYAGSSTVI	BBBAELLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-23*02	100.0	Hu_IGLV2-23*02	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022