PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6TXZ

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	12	AASGFTFSSYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	12	AISVSGGSTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H3	10	H3-10-*	-1	AKANWGFFDY	BBBAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	12	AASGFTFSSYAMS	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	11	AISVSGGSTY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H3	10	H3-10-*	-1	AKANWGFFDY	BBBAALBBAB
I	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	12	AASGFTFSSYAMS	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	12	AISVSGGSTY	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H3	10	H3-10-*	-1	AKANWGFFDY	BBBAALBBAB
J	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	12	AASGFTFSSYAMS	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	12	AISVSGGSTY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H3	10	H3-10-*	-1	AKANWGFFDY	BBBAALBBAB
K	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L1	14	L1-14-2	21	TGTSSDVGgYNYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L2	8	L2-8-1	13	YDVSKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	0.0	L3	8	L3-8-4	24	SSYADSVV	BBAAABBB
L	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BBBAAAAAABABBB
M	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L2	8	L2-8-1	13	YDVSKRPS	BLEABBBB
M	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	0.0	L3	8	L3-8-4	24	SSYADSVV	BBAAABBB
M	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
N	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L1	14	L1-14-*	-1	TGTSSDVGgYNYVS	BLBBABBLAAABBB
N	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L2	8	L2-8-1	13	YDVSKRPS	BLEABBBB
N	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	0.0	L3	8	L3-8-4	24	SSYADSVV	BBAAABBB
N	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	18	KSGNTA	BBEABB
O	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L1	14	L1-14-2	16	TGTSSDVGgYNYVS	BBBAAAAAABABBB
O	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L2	8	L2-8-1	13	YDVSKRPS	BLEABBBB
O	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	0.0	L3	8	L3-8-4	25	SSYADSVV	BBAAABBB
O	lambda	Homo.sapiens	Hu_IGLV2-11*01	100.0	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022