PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PBW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV2-23*01	78.6	L1	14	L1-14-2	16	TGTSNDVGiYNHVS	BBBAAAAAABABBB
C	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV2-23*01	62.5	L2	8	L2-8-1	10	YDVNKRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV2-23*01	77.8	L3	10	L3-10-2	4	CSYAGSSAWV	BBBAELLBBB
C	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV2-23*01	83.3	L4	6	L4-6-2	9	KSGDTA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	84.6	H1	13	H1-13-1	14	RASGYTFTNYAMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	90.0	H2	10	H2-10-1	12	WINAGNGYTK	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	100.0	H3	21	H3-21-*	-1	ARDSFYdilsgpvYHYYGMDV
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	95.9	Hu_IGHV1-3*01	87.5	H4	8	H4-8-1	4	RDTSATTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022