PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NMV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	83.3	Hu_IGHV3-23*04	61.5	H1	13	H1-13-1	18	TASGFTFTSSTMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	83.3	Hu_IGHV3-23*04	60.0	H2	10	H2-10-2	16	SISTSGVITY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	83.3	Hu_IGHV3-23*04	50.0	H3	7	H3-7-*	-1	ATDTFDH	BBEALAB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	83.3	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	71.2	CDRLenMismatch	-1.0	L1	8	L1-8-1	13	FGSSGNYG	BLBABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	71.2	Hu_IGLV3-25*02	37.5	L2	8	L2-8-*	-1	HYNNKRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	71.2	Hu_IGLV3-25*02	0.0	L3	9	L3-9-*	-1	GAWETGSAT	BBBBBLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	71.2	Hu_IGLV3-25*02	50.0	L4	6	L4-6-2	17	KSGSTG	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022