PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6NMT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Ch_IGLV1-1*02	83.3	Ch_IGLV1-1*02	62.5	L1	8	L1-8-1	11	SGSRGRYG	BLBABBBB
A	lambda	Homo.sapiens	Ch_IGLV1-1*02	83.3	Ch_IGLV1-1*02	50.0	L2	8	L2-8-*	-1	YRDNQRPS	BLEABBBA
A	lambda	Homo.sapiens	Ch_IGLV1-1*02	83.3	Ch_IGLV1-1*02	44.4	L3	9	L3-9-*	-1	GSYDGSIDI	BBBALABBB
A	lambda	Homo.sapiens	Ch_IGLV1-1*02	83.3	Ch_IGLV1-1*02	66.7	L4	6	L4-6-2	17	TSGSTS	BBEABB
B	heavy	Homo.sapiens	Ch_IGHV1-1*01	90.3	Ch_IGHV1-1*01	76.9	H1	13	H1-13-1	6	KASGFIFSDYGMN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Ch_IGHV1-1*01	90.3	CDRLenMismatch	-1.0	H2	9	H2-9-1	11	QITSGSRTY	BBBAALBBB
B	heavy	Homo.sapiens	Ch_IGHV1-1*01	90.3	Ch_IGHV1-1*01	40.0	H3	13	H3-13-*	-1	ARDFGSGVGSIDA	BBBALAEAAABAB
B	heavy	Homo.sapiens	Ch_IGHV1-1*01	90.3	Ch_IGHV1-1*01	87.5	H4	8	H4-8-1	6	RDNRQSTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022