PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6LDX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	91.3	Rb_IGHV1S69*01	69.2	H1	13	H1-13-1	13	TVSGFSLNNNAMG	BBBLBBAAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	91.3	Rb_IGHV1S69*01	55.6	H2	9	H2-9-1	5	AIYTDGSTY	BBBAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	91.3	Rb_IGHV1S69*01	100.0	H3	11	H3-11-1	16	ARHGYTYSFNL	BBBBAALBBAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	91.3	Rb_IGHV1S69*01	83.3	H4	6	H4-6-1	8	KTSTTI	BBAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	76.9	L1	13	L1-13-3	4	QSSQSVYNndNLA	BBABBBBLLABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	87.5	L2	8	L2-8-1	6	YGASTLDS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	66.7	L3	10	L3-10-*	-1	QGAYNVdIYP	BBBBABBBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S12*01	91.0	Rb_IGKV1S12*01	100.0	L4	6	L4-6-1	4	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022