PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6JP7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	86.7	H1	15	H1-15-*	-1	TVSGGSVNtgSYYWS	BBBLBBAABEBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	44.4	H2	9	H2-9-1	16	YSSVSGTSN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H3	16	H3-16-*	-1	ARLNYDilTGYYFFDF
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSTYAIA	BBBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	50.0	L2	12	L2-12-2	12	NlssgGRHTRGD	BBBAALBBBBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	57.1	L3	8	L3-8-4	17	QTWDAGMV	BBBBABBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	14	SSGADR	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022