PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6GFE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	80.0	H1	15	H1-15-2	13	AISGDSVSSrsASWS	BBBLBBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	72.7	H2	11	H2-11-1	6	RTYYRShWYYE	BBBBBLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H3	13	H3-13-*	-1	ARMDVPSFRYFDV	BBBBEAAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	19	PDTSKNQF	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	80.0	H1	15	H1-15-2	14	AISGDSVSSrsASWS	BBBLBBAABAABBBB
K	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	72.7	H2	11	H2-11-1	7	RTYYRShWYYE	BBBBBLBBBBB
K	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H3	13	H3-13-*	-1	ARMDVPSFRYFDV	BBBBEAAALBBAB
K	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	18	PDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	83.3	L1	12	L1-12-1	7	RASQSVRsNYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	87.5	L2	8	L2-8-1	6	YGASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L3	9	L3-9-cis7-1	10	QQISNSPPT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
M	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	83.3	L1	12	L1-12-1	8	RASQSVRsNYLA	BBABBBBAAABB
M	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	87.5	L2	8	L2-8-1	6	YGASNRAT	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L3	9	L3-9-cis7-1	10	QQISNSPPT	BBAABBbBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022