PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6AVR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	100.0	H1	13	H1-13-1	11	AASGFAFSSYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	80.0	H2	10	H2-10-2	10	KVSSGGGSTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	100.0	H3	10	H3-10-1	16	ARHNYGSFAY	BBBBLLBBAB
H	heavy	Mus.musculus	Mo_IGHV5-12-1*01	93.2	Mo_IGHV5-12-1*01	100.0	H4	8	H4-8-1	9	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	95.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-1	7	RASQSISNHLH	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	95.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	BLLABBAA
L	kappa	Mus.musculus	Mo_IGKV5-43*01	95.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-cis7-1	7	QQSNSWPHT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	95.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022