PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6A4K

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	86.7	H1	15	H1-15-*	-1	TVSGGSVNtgSYYWS	BBBLEBAABEBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	44.4	H2	9	H2-9-*	-1	YSSVSGTSN	BBBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H3	16	H3-16-*	-1	ARLNYDilTGYYFFDF
H	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	15	VDTSKNQF	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	86.7	H1	15	H1-15-*	-1	TVSGGSVNtgSYYWS	BBBLBBAABEBBBBB
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	44.4	H2	9	H2-9-*	-1	YSSVSGTSN	BBBABEBBB
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H3	16	H3-16-*	-1	ARLNYDilTGYYFFDF
I	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	16	VDTSKNQF	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	86.7	H1	15	H1-15-*	-1	TVSGGSVNtgSYYWS	BBBLBBAABEBBBBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	44.4	H2	9	H2-9-*	-1	YSSVSGTSN	BBBAABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H3	16	H3-16-*	-1	ARLNYDilTGYYFFDF
J	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	20	VDTSKNQF	BBAAALBB
K	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	86.7	H1	15	H1-15-*	-1	TVSGGSVNtgSYYWS	BBBLEBAABEBBBBB
K	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	44.4	H2	9	H2-9-*	-1	YSSVSGTSN	BBBAABBBB
K	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H3	16	H3-16-*	-1	ARLNYDilTGYYFFDF
K	heavy	Homo.sapiens	Hu_IGHV4-61*01	90.4	Hu_IGHV4-61*01	100.0	H4	8	H4-8-1	16	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSTYAIA	BBBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	50.0	L2	12	L2-12-2	14	NlssgGRHTRGD	BBBAALBBBBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	57.1	L3	8	L3-8-4	17	QTWDAGMV	BBBBABBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	15	SSGADR	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSTYAIA	BBBBLAAABBBB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	50.0	L2	12	L2-12-*	-1	NlssgGRHTRGD	BBBABLBBBBBB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	57.1	L3	8	L3-8-4	14	QTWDAGMV	BBBAABBB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	16	SSGADR	BBEABB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSTYAIA	BBBBLAAABBBB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	50.0	L2	12	L2-12-2	10	NlssgGRHTRGD	BBBAALBBBBBB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	57.1	L3	8	L3-8-4	17	QTWDAGMV	BBBBABBB
N	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	14	SSGADR	BBEABB
O	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	91.7	L1	12	L1-12-*	-1	TLSSGHSTYAIA	BBBBLAAABBBB
O	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	50.0	L2	12	L2-12-2	11	NlssgGRHTRGD	BBBAALBBBBBB
O	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	57.1	L3	8	L3-8-4	17	QTWDAGMV	BBBBABBB
O	lambda	Homo.sapiens	Hu_IGLV4-69*01	89.7	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	13	SSGADR	BBEABB

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