PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5XCV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	100.0	H1	13	H1-13-1	10	AASGFTFSNYGMA	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	70.0	H2	10	H2-10-2	9	SISAGGDKTY	BBBAALABBB
A	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	50.0	H3	10	H3-10-2	16	AKTSRVYFDY	BBBBEABBAB
A	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	75.0	H4	8	H4-8-1	13	RDNAKTTH	BBAAALBB
B	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L1	13	L1-13-2	5	KRSTGNIGSNYVN	BBABEBAAABBBB
B	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L2	8	L2-8-1	9	YRDDKRPD	BLLABBBB
B	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	75.0	L3	8	L3-8-4	19	HSYSSGIV	BBBBABBB
B	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L4	8	L4-8-1	7	idRSSNSA	BBAAALBB
D	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	100.0	H1	13	H1-13-1	10	AASGFTFSNYGMA	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	70.0	H2	10	H2-10-2	9	SISAGGDKTY	BBBAALABBB
D	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	50.0	H3	10	H3-10-2	18	AKTSRVYFDY	BBBBLABBAB
D	heavy	Homo.sapiens	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	75.0	H4	8	H4-8-1	7	RDNAKTTH	BBAAALBB
E	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L1	13	L1-13-2	13	KRSTGNIGSNYVN	BBABEBAAABBBB
E	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L2	8	L2-8-1	13	YRDDKRPD	BLLABBBB
E	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	75.0	L3	8	L3-8-4	19	HSYSSGIV	BBBAABBB
E	lambda	Homo.sapiens	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L4	8	L4-8-1	17	idRSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022