PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5NMV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-5*01	98.6	Mo_IGHV2-5*01	92.3	H1	13	H1-13-1	13	TVSGFSLTNYGVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-5*01	98.6	Mo_IGHV2-5*01	88.9	H2	9	H2-9-1	10	VIWRGGSID	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-5*01	98.6	Mo_IGHV2-5*01	100.0	H3	15	H3-15-*	-1	AKNSHGNYvGYAMDY
H	heavy	Mus.musculus	Mo_IGHV2-5*01	98.6	Mo_IGHV2-5*01	100.0	H4	8	H4-8-1	8	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	81.8	L1	11	L1-11-1	7	KASQSVGPAVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	6	YSASNRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	85.7	L3	8	L3-8-4	17	QQYTSYPT	BBBAABBB
L	kappa	Mus.musculus	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	83.3	L4	6	L4-6-1	6	GSGADF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022