PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 5K9K

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	80.0	H1	15	H1-15-2	12	VISGDTVSSnrAAWN	BBBLBBAABAABBBB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	90.9	H2	11	H2-11-1	8	RTYYrSKWYTD	BBBBBLBBBBB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H3	16	H3-16-*	-1	ARGSAMIFgiVIILES
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	17	PDTSKNQF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	7	RASQSVaSSYLA	BBABBBBAAABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	9	YGASSRAT	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QQYDGSQYT	BBBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	80.0	H1	15	H1-15-1	16	VISGDTVSSnrAAWN	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	90.9	H2	11	H2-11-1	6	RTYYrSKWYTD	BBBBBLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H3	16	H3-16-*	-1	ARGSAMIFgiVIILES
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	24	PDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	12	RASQSVaSSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	13	YGASSRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QQYDGSQYT	BBBALABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	97.1	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022