PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4QEX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	92.3	H1	13	H1-13-*	-1	KTSGYTFTENTMH	BBBLBBAABLBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	19	GINTDNGGTT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	0.0	H3	9	H3-9-2	24	STGYDAMDY	BBBAABBAB
H	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	100.0	H4	8	H4-8-1	14	VDKSSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	92.3	H1	13	H1-13-*	-1	KTSGYTFTENTMH	BBBLBBAABLBBB
I	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	70.0	H2	10	H2-10-1	19	GINTDNGGTT	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	0.0	H3	9	H3-9-2	25	STGYDAMDY	BBBAABBAB
I	heavy	Mus.musculus	Mo_IGHV1S113*01	91.7	Mo_IGHV1S113*01	100.0	H4	8	H4-8-1	14	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	86.7	L1	15	L1-15-1	17	RASKGVDSYgnsfMH	BBABBABELLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	87.5	L2	8	L2-8-*	-1	YLASHLES	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	19	QQNNEDPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	25	GSRTDF	EAAABB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	86.7	L1	15	L1-15-1	17	RASKGVDSYgnsfMH	BBABBABELLBBBBB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	87.5	L2	8	L2-8-*	-1	YLASHLES	BLLABBBA
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	19	QQNNEDPFT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.6	Mo_IGKV3-10*01	100.0	L4	6	L4-6-3	25	GSRTDF	EAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022