PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4LQF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-12*02	93.2	Mo_IGHV5-12*02	92.3	H1	13	H1-13-1	8	ATSGFTFSDYYIY	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-12*02	93.2	Mo_IGHV5-12*02	80.0	H2	10	H2-10-2	8	YISNSGGNTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-12*02	93.2	Mo_IGHV5-12*02	100.0	H3	10	H3-10-1	17	ARQWGGAMDY	BBBBLLBBAB
H	heavy	Mus.musculus	Mo_IGHV5-12*02	93.2	Mo_IGHV5-12*02	100.0	H4	8	H4-8-1	4	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	87.5	L1	16	L1-16-1	8	RSSQSLihtngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	8	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	85.7	L3	10	L3-10-cis78-1	6	SQSTHIpPWT	BBAABBbbBB
L	kappa	Mus.musculus	Mo_IGKV1-110*01	100.0	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022