PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4K9E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Mo_IGHV14-1*01	69.2	H1	13	H1-13-1	13	AASGFNISVYMMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Mo_IGHV14-1*01	40.0	H2	10	H2-10-1	10	SIYPYSGYTY	BBBAAALBBB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	10	H3-10-1	12	ARYVYHALDY	BBBBLLBBAB
H	heavy	Mus.musculus	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	9	ADTSKNTA	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Mo_IGLV4*01	23.1	L1	13	L1-13-*	-1	RASQRGlrNVAVA	BBBaBLBBLBBBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Mo_IGLV4*01	25.0	L2	8	L2-8-1	9	YSASSLYS	BLEABBBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	28.6	L3	10	L3-10-*	-1	QQWAvHSLIT	BBBBABLEBB
L	kappa	Mus.musculus	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-3	26	RSGTDF	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022