PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4HBC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	95.6	Rb_IGHV1S69*01	69.2	H1	13	H1-13-1	14	TVSGFSLNTYSMF	BBBLBBAAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	95.6	Rb_IGHV1S69*01	55.6	H2	9	H2-9-1	8	IISNFGVIY	BBBAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	95.6	Rb_IGHV1S69*01	50.0	H3	12	H3-12-*	-1	VRKYGSEWGGDL	BBBBAABBBBAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	95.6	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	7	KTSTTV	BBAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	88.4	Rb_IGKV1S10*01	81.8	L1	11	L1-11-1	6	QASQSISSYLA	BBABBAEABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	88.4	Rb_IGKV1S10*01	62.5	L2	8	L2-8-1	6	YETSTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	88.4	Rb_IGKV1S10*01	30.0	L3	11	L3-11-*	-1	QSTYENPtyVS	BBABBBAAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	88.4	Rb_IGKV1S10*01	83.3	L4	6	L4-6-1	8	GSGTDF	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022