PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4GLR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	76.9	H1	13	H1-13-1	9	KASGFTLSSYQMM	BBBLBBAAABBBB
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	50.0	H2	10	H2-10-2	11	GITSRGGVTG	BBBAALABBB
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	60.0	H3	20	H3-20-*	-1	AKPALDSDQCGFpeagciDA
H	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	100.0	H4	8	H4-8-1	6	RDNGQSTV	BBAAALBB
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	50.0	L1	8	L1-8-1	8	SGSDYDYG	BLBABBBB
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	62.5	L2	8	L2-8-*	-1	YWNDKRPS	BLEABBBA
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	33.3	L3	11	L3-11-1	20	GAYDGSAGGGI	BBBBAAALBBB
I	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	66.7	L4	6	L4-6-2	15	TSGSTS	BBEABB
J	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	76.9	H1	13	H1-13-1	9	KASGFTLSSYQMM	BBBLBBAAABBBB
J	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	50.0	H2	10	H2-10-2	11	GITSRGGVTG	BBBAALABBB
J	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	60.0	H3	20	H3-20-*	-1	AKPALDSDQCGFpeagciDA
J	heavy	Gallus.gallus	Ch_IGHV1-1*01	97.2	Ch_IGHV1-1*01	100.0	H4	8	H4-8-1	6	RDNGQSTV	BBAAALBB
K	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	50.0	L1	8	L1-8-1	8	SGSDYDYG	BLBABBBB
K	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	62.5	L2	8	L2-8-*	-1	YWNDKRPS	BLEABBBA
K	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	33.3	L3	11	L3-11-1	17	GAYDGSAGGGI	BBBBAAALBBB
K	lambda	Gallus.gallus	Ch_IGLV1-1*02	86.8	Ch_IGLV1-1*02	66.7	L4	6	L4-6-2	16	TSGSTS	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022