PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4AMK

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S121*01	98.3	Mo_IGHV1S121*01	100.0	H1	13	H1-13-1	10	KASGYTFTSYNMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S121*01	98.3	Mo_IGHV1S121*01	90.0	H2	10	H2-10-1	9	VIYPGNGDTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S121*01	98.3	Mo_IGHV1S121*01	0.0	H3	10	H3-10-1	21	SRGGAGIMAY	BBBELLBBAB
H	heavy	Mus.musculus	Mo_IGHV1S121*01	98.3	Mo_IGHV1S121*01	100.0	H4	8	H4-8-1	10	ADKSSSTA	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-*	-1	RSSTGAVTtSNYAN	BALAELBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	7	GGTNNRAP	BLLABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	11	ALWYSNHLV	BBBBEABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	16	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022