PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3S34

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-21*01	98.6	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYSMN	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-21*01	98.6	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	10	SISSSSSYIY	BBBAALABBB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-21*01	98.6	Hu_IGHV3-21*01	100.0	H3	9	H3-9-2	11	ARVTDAFDI	BBBAABBAB
H	heavy	Mus.musculus.Homo.sapiens	Hu_IGHV3-21*01	98.6	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-12*01	92.8	Hu_IGKV1-12*01	72.7	L1	11	L1-11-1	5	RASQGIDNWLG	BBABBAEABBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-12*01	92.8	Hu_IGKV1-12*01	50.0	L2	8	L2-8-1	4	YDASNLDT	BLLABBBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-12*01	92.8	Hu_IGKV1-12*01	71.4	L3	9	L3-9-cis7-1	6	QQAKAFPPT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Hu_IGKV1-12*01	92.8	Hu_IGKV1-12*01	83.3	L4	6	L4-6-1	8	GSGTYF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022