PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2NR6

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	90.9	L1	11	L1-11-*	-1	KASQIVSTAVA	BBABBBAABBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	17	YSASYRYT	BLEABBBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	71.4	L3	9	L3-9-2	17	QQHYNSPQT	BBAABABBB
C	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	15	TASGFNIKDTYIH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	9	RIDPANGNTR	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	100.0	H3	9	H3-9-2	16	ARWVRQMDY	BBBAABBAB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	8	ADTSSNTA	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	8	KASQIVSTAVA	BBABBAEABBB
E	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	10	YSASYRYT	BLEABBBB
E	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	71.4	L3	9	L3-9-2	21	QQHYNSPQT	BBAABABBB
E	kappa	Mus.musculus	Mo_IGKV6-17*01	100.0	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
F	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	13	TASGFNIKDTYIH	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	14	RIDPANGNTR	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	100.0	H3	9	H3-9-2	13	ARWVRQMDY	BBBAABBAB
F	heavy	Mus.musculus	Mo_IGHV14-3*02	91.8	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	9	ADTSSNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022