PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 2DQE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3S1*01	95.8	Mo_IGHV3S1*01	92.3	H1	13	H1-13-1	18	SVTGDSITSDYWS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV3S1*01	95.8	Mo_IGHV3S1*01	77.8	H2	9	H2-9-1	7	YVSASGSTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3S1*01	95.8	Mo_IGHV3S1*01	50.0	H3	7	H3-7-1	6	ANWDGDY	BBAALAB
H	heavy	Mus.musculus	Mo_IGHV3S1*01	95.8	Mo_IGHV3S1*01	100.0	H4	8	H4-8-1	10	RDTSKNQY	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-1	5	RASQSIGNNLH	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-1	16	KYASQSIS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-cis7-1	5	QQSNSWPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022