PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1NGY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	90.9	L1	11	L1-11-*	-1	KASQNVGTPVA	BBAABBAABBB
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	11	YSASNRYT	BLLABBBB
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	8	QQYSSYPLT	BBAABBbBB
A	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	94.1	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S36*01	94.4	Mo_IGHV1S36*01	100.0	H1	13	H1-13-1	6	KASGYTFTSYWMH	BBBLBBAAABBBB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S36*01	94.4	Mo_IGHV1S36*01	90.0	H2	10	H2-10-1	17	MIDPNSGGTK	BBBAAALBBB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S36*01	94.4	Mo_IGHV1S36*01	100.0	H3	7	H3-7-1	15	TRRDMDY	BBAALAB
B	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S36*01	94.4	Mo_IGHV1S36*01	87.5	H4	8	H4-8-1	12	VDKPSNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022