PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1N7M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L1	11	L1-11-1	4	KASQNVGTAVA	BBABBAEABBB
H	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L2	8	L2-8-1	7	YSASNRYT	BLLABBBB
H	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L3	9	L3-9-cis7-1	5	QQYSSYPLT	BBAABBbBB
H	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV6-13*01	95.6	Mo_IGKV6-13*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
L	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	100.0	H1	13	H1-13-1	8	KASGYTFTSYWMH	BBBLBBAAABBBB
L	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	100.0	H2	10	H2-10-1	7	RIDPNSGGTK	BBBAAALBBB
L	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	0.0	H3	7	H3-7-1	11	TRRDSDY	BBAALAB
L	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1-72*03	95.1	Mo_IGHV1-72*03	100.0	H4	8	H4-8-1	8	VDKPSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022