PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1IC4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.2	Mo_IGHV3-8*02	84.6	H1	13	H1-13-4	17	SVTGDSITSAYWS	BBBLEBABLBBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.2	Mo_IGHV3-8*02	88.9	H2	9	H2-9-1	14	YVSYSGSTY	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.2	Mo_IGHV3-8*02	50.0	H3	7	H3-7-1	10	ANWDGDY	BBAALAB
H	heavy	Mus.musculus	Mo_IGHV3-8*02	97.2	Mo_IGHV3-8*02	100.0	H4	8	H4-8-1	13	RDTSKNQY	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	90.9	L1	11	L1-11-1	6	RASQSIGNNLH	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-1	18	KYASQSIS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L3	9	L3-9-cis7-1	14	QQSNSWPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV5-43*01	98.6	Mo_IGKV5-43*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022