PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 1CFQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV14-111*01	95.7	Mo_IGKV14-111*01	81.8	L1	11	L1-11-2	13	KASQDINSFLT	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV14-111*01	95.7	Mo_IGKV14-111*01	75.0	L2	8	L2-8-*	-1	YRANRLMI	BLLABBBA
A	kappa	Mus.musculus	Mo_IGKV14-111*01	95.7	Mo_IGKV14-111*01	85.7	L3	9	L3-9-cis7-1	12	LQYDDFPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV14-111*01	95.7	Mo_IGKV14-111*01	83.3	L4	6	L4-6-1	9	GSGQTY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-23*01	94.4	Mo_IGHV1-23*01	76.9	H1	13	H1-13-*	-1	KALGYIFTDYEIH	BBBLBBBLABBBB
B	heavy	Mus.musculus	Mo_IGHV1-23*01	94.4	Mo_IGHV1-23*01	50.0	H2	10	H2-10-1	15	GIHPGSSGTA	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-23*01	94.4	Mo_IGHV1-23*01	100.0	H3	5	H3-5-2	11	TRKDY	BALAB
B	heavy	Mus.musculus	Mo_IGHV1-23*01	94.4	Mo_IGHV1-23*01	87.5	H4	8	H4-8-1	14	ADKSSTTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022