PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7E7Y

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	92.3	H1	13	H1-13-1	12	AASGVTVSSNYMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	77.8	H2	9	H2-9-*	-1	AVYSGGSTY	BBBBLLBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	100.0	H3	19	H3-19-*	-1	ARLINHYYDSsgdggAFDI
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	100.0	H4	8	H4-8-1	8	RHNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	100.0	L1	14	L1-14-2	8	TGTSSDVGSyNLVS	BBBAABAAABAABB
B	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	87.5	L2	8	L2-8-1	10	YEVTKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	88.9	L3	10	L3-10-2	8	CSYAGSSTWV	BBBAELLBBB
B	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	92.3	H1	13	H1-13-*	-1	AASGVTVSSNYMS	BBAABBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	77.8	H2	9	H2-9-*	-1	AVYSGGSTY	BBBBLLBBB
C	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	100.0	H3	19	H3-19-*	-1	ARLINHYYDssgdggAFDI
C	heavy	Homo.sapiens	Hu_IGHV3-53*04	95.9	Hu_IGHV3-53*04	100.0	H4	8	H4-8-1	8	RHNSKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	100.0	L1	14	L1-14-2	4	TGTSSDVGSyNLVS	BBBAAAAAABAABB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	87.5	L2	8	L2-8-1	10	YEVTKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	88.9	L3	10	L3-10-2	6	CSYAGSSTWV	BBBAELLBBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*02	93.8	Hu_IGLV2-23*02	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022