PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6OL7

#CDRs = 6; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	76.9	H1	13	H1-13-1	9	AASGFTFSNSAMS	PBBLBPAADBPBB
A	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	50	H2	10	H2-10-2	9	TINNNGGYTH	BBPAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV	-1	H3	10	H3-10-*	-1	TRQTYWYLDV	BPBBGDBBAB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L1	11	L1-11-*	-1	RASQSVSSYLA	BPABPBPBBPB
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	9	YDASNRAT	BLLDBPPP
B	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQYEF	BBGAP
C	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H1	13	H1-13-1	7	KASGYTFTGYYMH	PPBLBPAAABPBP
C	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H2	10	H2-10-1	9	WINPNSGGTN	BBPAADLPBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGKNSDYNWDFQH	BBPABAABAAPPAB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	7	KSSQSLLYSGNQKNYLA	BPABPDPPAADLBPPBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	100	L2	8	L2-8-1	8	YWASTRES	BLLDPPPP
D	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	15	QQFYFYPWT	BPDDPPpPB
E	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	76.9	H1	13	H1-13-1	10	AASGFTFSNSAMS	PBBLBPAADBPBB
E	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	50	H2	10	H2-10-2	11	TINNNGGYTH	BBPADLABBB
E	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV	-1	H3	10	H3-10-*	-1	TRQTYWYLDV	BPBBGDBBAB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L1	11	L1-11-*	-1	RASQSVSSYLA	BPABPBPBBPB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	7	YDASNRAT	BLLDBPPP
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQYEF	BBGAP
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H1	13	H1-13-1	8	KASGYTFTGYYMH	PBBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H2	10	H2-10-1	8	WINPNSGGTN	BBPAADLPBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGKNSDYNWDFQH	BBPABAABAAPPAB
I	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H1	13	H1-13-1	6	KASGYTFTGYYMH	PBBLBPAAABPBB
I	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H2	10	H2-10-1	10	WINPNSGGTN	BBPAAALPBB
I	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGKNSDYNWDFQH	BBPABAABAAPPAB
J	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	6	KSSQSLLYSGNQKNYLA	BPABPDPPAADLBPPBB
J	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	100	L2	8	L2-8-1	6	YWASTRES	BLLDPPPP
J	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	16	QQFYFYPWT	BPDDBPpPB
K	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	76.9	H1	13	H1-13-1	9	AASGFTFSNSAMS	PBBLBPAADBPBB
K	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	50	H2	10	H2-10-2	9	TINNNGGYTH	BBPADLABBB
K	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV	-1	H3	10	H3-10-*	-1	TRQTYWYLDV	BPBBGDBBAB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L1	11	L1-11-*	-1	RASQSVSSYLA	BPABPBPBBPB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	8	YDASNRAT	BLLDBPPP
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQYEF	BBGAP
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H1	13	H1-13-1	8	KASGYTFTGYYMH	PBBLBPAAABPBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV1-2*03	100	H2	10	H2-10-1	9	WINPNSGGTN	BBPAADLPBB
M	heavy	Homo.sapiens	Hu_IGHV1-2*03	98.6	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARGKNSDYNWDFQH	BBPABAABAAPPAB
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L1	11	L1-11-*	-1	RASQSVSSYLA	BPABPBPBBPB
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV3-11*01	100	L2	8	L2-8-1	9	YDASNRAT	BLLDBPPP
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	100	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQYEF	BBGAP
O	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	7	KSSQSLLYSGNQKNYLA	BPABPDBPAADLBPPBB
O	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	100	L2	8	L2-8-1	7	YWASTRES	BLLDPPPP
O	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	16	QQFYFYPWT	BPDDPPpPB
P	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	76.9	H1	13	H1-13-1	9	AASGFTFSNSAMS	PBBLBPAADBPBB
P	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV5-9-2*01	50	H2	10	H2-10-2	11	TINNNGGYTH	BBPADLABBB
P	heavy	Mus.musculus	Mo_IGHV5-9-2*01	90.4	Mo_IGHV	-1	H3	10	H3-10-*	-1	TRQTYWYLDV	BPBBGDBBAB
Q	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	5	KSSQSLLYSGNQKNYLA	BBABPDBPAADLBPPBB
Q	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV8-30*01	100	L2	8	L2-8-1	7	YWASTRES	BLLDPPPP
Q	kappa	Mus.musculus	Mo_IGKV8-30*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	15	QQFYFYPWT	BPDDBPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019