PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 6MB3

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	10	ATSGFTFSNYGMH	PBBLBPAAABPBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	6	IIWYDGSRNF	BBPADLABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBBDB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	10	ATSGFTFSNYGMH	PBBLBPAAABPBB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	6	IIWYDGSRNF	BBPADLABBB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBPDP
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	10	ATSGFTFSNYGMH	PBBLBPAAABPBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	6	IIWYDGSRNF	BBPADLABBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBPDB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	11	ATSGFTFSNYGMH	PBBLBPAAABPBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	6	IIWYDGSRNF	BBPADLABBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBPDB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	10	ATSGFTFSNYGMH	PBBLBPAAABPBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	6	IIWYDGSRNF	BBPADLABBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBPDB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	11	ATSGFTFSNYGMH	PBBLBPAAABPBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	6	IIWYDGSRNF	BBPADLABBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBPDB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	10	ATSGFTFSNYGMH	PBBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	7	IIWYDGSRNF	BBPADLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDDBPBPDP
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	10	ATSGFTFSNYGMH	PBBLBPAAABPBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	11	IIWYDGSRNF	BBPADLABBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBBDB
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	84.6	H1	13	H1-13-1	12	ATSGFTFSNYGMH	PBBLBPAAABPBB
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	60	H2	10	H2-10-2	9	IIWYDGSRNF	BBPADLABBB
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	14	H3-14-*	-1	ARAAYYDTSGYGDY	BPPBBDDABBBBDB
K	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPPB
K	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	23	YGNINRPS	BLLDPBPA
K	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	23	YGNINRPS	BLLDPBPA
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
M	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPBB
M	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	24	YGNINRPS	BLLDPBPA
M	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBBAABAPABB
N	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPBB
N	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	23	YGNINRPS	BLLDPBPA
N	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
O	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPBB
O	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	23	YGNINRPS	BLLDPBPA
O	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
P	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPBB
P	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	23	YGNINRPS	BLLDPBPA
P	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
Q	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADAAALPPPB
Q	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	23	YGNINRPS	BLLDPBPA
Q	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
R	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBAADDAALPPPB
R	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	24	YGNINRPS	BLLDPBPA
R	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB
S	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	92.9	L1	14	L1-14-*	-1	TGGSSNIGAGYDVH	BBBADDDAALPPPB
S	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV1-40*01	87.5	L2	8	L2-8-2	24	YGNINRPS	BLLDPBPA
S	lambda	Homo.sapiens	Hu_IGLV1-40*01	98.5	Hu_IGLV	-1	L3	12	L3-12-*	-1	QSYDRRLSGSWV	BBBPAABAPABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019