PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5ZIA

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	84.6	H1	13	H1-13-1	10	TASGYTFTGYYLH	BPBLBPAAABPBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	70	H2	10	H2-10-1	13	WVNPRSGGTS	BBPAAALPBB
A	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	13	H3-13-*	-1	AVGRIPDVTAFDI	BBBDPPLBPBBDB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	32	KSSESLLYDSNNKNYLA	BPADGDPBAADLBPPBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100	L2	8	L2-8-1	8	YWASTRES	BLGDPPPP
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYFSTPWT	BPDABPpPB
D	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	84.6	H1	13	H1-13-1	10	TASGYTFTGYYLH	BPBLBPAADBPBB
D	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	70	H2	10	H2-10-1	12	WVNPRSGGTS	BBPAAALPBB
D	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	13	H3-13-*	-1	AVGRIPDVTAFDI	BBBDPPLBPBBDB
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	32	KSSESLLYDSNNKNYLA	BPADGAPPAADLBPPBB
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100	L2	8	L2-8-1	7	YWASTRES	BLGDPPPP
E	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYFSTPWT	BPDABPpPB
G	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	84.6	H1	13	H1-13-1	10	TASGYTFTGYYLH	BPBLBPAADBPBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	70	H2	10	H2-10-1	13	WVNPRSGGTS	BBPAAALPBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	13	H3-13-*	-1	AVGRIPDVTAFDI	BBBDPPLBPBBDB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	84.6	H1	13	H1-13-1	10	TASGYTFTGYYLH	BPBLBPAADBPBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	70	H2	10	H2-10-1	13	WVNPRSGGTS	BBPAAALPBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	13	H3-13-*	-1	AVGRIPDVTAFDI	BBBDPPLBPBBDB
I	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	33	KSSESLLYDSNNKNYLA	BPADGDPPAADLBPPBB
I	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100	L2	8	L2-8-1	7	YWASTRES	BLGDPPPP
I	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYFSTPWT	BPDABPpPB
K	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	84.6	H1	13	H1-13-1	12	TASGYTFTGYYLH	BPBLBPAADBPBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	70	H2	10	H2-10-1	14	WVNPRSGGTS	BBPAAALPBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	13	H3-13-*	-1	AVGRIPDVTAFDI	BBBDPPLBPBBDB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	31	KSSESLLYDSNNKNYLA	BPADGAPPAADLBPPBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100	L2	8	L2-8-1	8	YWASTRES	BLGDPPPP
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYFSTPWT	BPDABBpPB
M	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	82.4	L1	17	L1-17-1	34	KSSESLLYDSNNKNYLA	BPADGAPPADDLBBPBB
M	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100	L2	8	L2-8-1	10	YWASTRES	BLGDPPPP
M	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	13	QQYFSTPWT	BPDABBpPB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	84.6	H1	13	H1-13-1	13	TASGYTFTGYYLH	BPBLBPAADBPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV1-2*03	70	H2	10	H2-10-1	14	WVNPRSGGTS	BBPAAALPBB
O	heavy	Homo.sapiens	Hu_IGHV1-2*03	89	Hu_IGHV	-1	H3	13	H3-13-*	-1	AVGRIPDVTAFDI	BBBDPPLBPBBDB
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	82.4	L1	17	L1-17-*	-1	KSSESLLYDSNNKNYLA	BPADGDPPAABPBPPBB
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV4-1*01	100	L2	8	L2-8-1	8	YWASTRES	BLGDPPPP
P	kappa	Homo.sapiens	Hu_IGKV4-1*01	95.7	Hu_IGKV	-1	L3	9	L3-9-cis7-1	15	QQYFSTPWT	BPDABBpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019