PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5YWO

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
M	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	L1	12	L1-12-*	-1	RASQSVSTSYMH	BBAPPLAGDLBB
M	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV3-12*01	87.5	L2	8	L2-8-2	26	YLVSNLES	BLLDBPPA
M	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-*	-1	QHIRELTRS	BBBGPBpPB
N	heavy	Mus.musculus	Mo_IGHV9-2-1*01	86.3	Mo_IGHV9-2-1*01	76.9	H1	13	H1-13-1	16	TTSGYTFTDYAMH	BBBLBPAAABPBP
N	heavy	Mus.musculus	Mo_IGHV9-2-1*01	86.3	Mo_IGHV9-2-1*01	90	H2	10	H2-10-cis6-*	-1	WINTATGEPT	BBPAAlLPPB
N	heavy	Mus.musculus	Mo_IGHV9-2-1*01	86.3	Mo_IGHV	-1	H3	11	H3-11-*	-1	ASDGRYWYFGV	BBPDGADGBDB
Q	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	CDRLenMismatch	-1	L1	12	L1-12-*	-1	RASQSVSTSYMH	BBAPPLAGDLBB
Q	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV3-12*01	87.5	L2	8	L2-8-2	26	YLVSNLES	BLLDBPPA
Q	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV	-1	L3	9	L3-9-cis7-*	-1	QHIRELTRS	BBBGPBpPB
R	heavy	Mus.musculus	Mo_IGHV9-2-1*01	86.3	Mo_IGHV9-2-1*01	76.9	H1	13	H1-13-1	16	TTSGYTFTDYAMH	BBBLBPAAABPBP
R	heavy	Mus.musculus	Mo_IGHV9-2-1*01	86.3	Mo_IGHV9-2-1*01	90	H2	10	H2-10-cis6-*	-1	WINTATGEPT	BBPAAlLPPB
R	heavy	Mus.musculus	Mo_IGHV9-2-1*01	86.3	Mo_IGHV	-1	H3	11	H3-11-*	-1	ASDGRYWYFGV	BBPDGAAGBDB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019