PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5WKO

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	PPBBGBPLABPBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	60	H2	10	H2-10-*	-1	GISPIFGPPK	BBBADABPPB
A	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV	-1	H3	16	H3-16-cis7-*	-1	ARKLEPPYYFYSYMDV	BBPAPPpDABPBBBAB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L1	12	L1-12-*	-1	RASQSVSSSYLA	BBABPAGPBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	16	YGASSRAT	BGDDPPPP
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-2	24	QQYVSTPLT	BBDABGPPB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	PPBPBLPLABPBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	60	H2	10	H2-10-*	-1	GISPIFGPPK	BBBADABPPB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV	-1	H3	16	H3-16-cis7-*	-1	ARKLEPPYYFYSYMDV	BBPDPPpDABPBBBAB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L1	12	L1-12-*	-1	RASQSVSSSYLA	BBABPDGPPBBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	16	YGASSRAT	BGDDPPPP
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYVSTPLT	BBDABPpPB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	PPBGGPPLABPBP
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	60	H2	10	H2-10-*	-1	GISPIFGPPK	BBBADABPPB
E	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV	-1	H3	16	H3-16-cis7-*	-1	ARKLEPPYYFYSYMDV	BBPAPPpDABPBBBAB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L1	12	L1-12-2	37	RASQSVSSSYLA	BBABPBPGBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	16	YGASSRAT	BGDDPPPP
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYVSTPLT	BBDABPpPB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	PPBBGPPLABPBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	60	H2	10	H2-10-*	-1	GISPIFGPPK	BBBADABPPB
G	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV	-1	H3	16	H3-16-cis7-*	-1	ARKLEPPYYFYSYMDV	BBPAPPpDABPBBBAB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L1	12	L1-12-2	37	RASQSVSSSYLA	BBABPPPGBBBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	16	YGASSRAT	BGDDPPPP
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYVSTPLT	BBDABPpPB
I	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	PPBBGPPLABPBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	60	H2	10	H2-10-*	-1	GISPIFGPPK	BBBADABPPB
I	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV	-1	H3	16	H3-16-cis7-*	-1	ARKLEPPYYFYSYMDV	BBPDPPpDABPBBBAB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L1	12	L1-12-2	39	RASQSVSSSYLA	BBABPBPGDPBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	16	YGASSRAT	BGDDPPPP
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYVSTPLT	BBDABPpPB
K	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	H1	13	H1-13-*	-1	RASGGTFGNYAIN	PPBBGPPLABPBP
K	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	60	H2	10	H2-10-*	-1	GISPIFGPPK	BBBADABPPB
K	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV	-1	H3	16	H3-16-cis7-*	-1	ARKLEPPYYFYSYMDV	BBPAPPpDABPBBBAB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L1	12	L1-12-2	36	RASQSVSSSYLA	BBABPPPGPBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV3-20*01	100	L2	8	L2-8-4	16	YGASSRAT	BGDDPPPP
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.5	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYVSTPLT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019