PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5GS1

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BPABPPPLLPBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	27	HQYSDISPT	BBDABABPB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	BPBLBPAADPPBB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
B	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPPDGADLGPAB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	13	AASGFTFRNSAMH	PBBLBPAADPPBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPPDGADLGPAB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BBABPPPLLPBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	29	HQYSDISPT	BPDABABPB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	10	AASGFTFRNSAMH	PPBLBPAADPPBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPAPPBBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPPAGADLGPAB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	9	RASQSVSSNYLA	BBABPPPLLPBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	5	YDSSSRAT	BLLDPPPP
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	30	HQYSDISPT	BBDABABPB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	BPBLBPAAAPPBB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BBABPPPLLPBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	27	HQYSDISPT	BBDABABPB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	BPBLBPAAAPPBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPAPPBPB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BBABPPPLLPBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	6	YDSSSRAT	BLLDPPPP
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	31	HQYSDISPT	BBDABABPB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	14	AASGFTFRNSAMH	PPBLBPAADPPBB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
G	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BPABPPPLLPBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	28	HQYSDISPT	BBDABABPB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	13	AASGFTFRNSAMH	BBBLBPAADPPBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-cis6-*	-1	SIWYSGSNTY	BBBPBlPPPB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	7	RASQSVSSNYLA	BPABPPPLLPBB
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
H	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	29	HQYSDISPT	BBDABABPB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	PBBLBPAADPPBB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
I	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BBABPPPLLPBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	6	YDSSSRAT	BLLDPPPP
I	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	28	HQYSDISPT	BBDABABPB
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	BBBLBPAAAPPBB
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
J	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	9	RASQSVSSNYLA	BPABPPPLLPBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	6	YDSSSRAT	BLLDPPPP
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	27	HQYSDISPT	BBDABABPB
K	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	13	AASGFTFRNSAMH	BPBLBPAADPPBB
K	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
K	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BBABPPPLLPBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	28	HQYSDISPT	BBDABABPB
L	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	BPBLBPAAAPPBB
L	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPAABBPB
L	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BBABPPPLLPBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	6	YDSSSRAT	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	28	HQYSDISPT	BBDABABPB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BPABPPPLLPBB
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
M	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	27	HQYSDISPT	BBDABABPB
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	12	AASGFTFRNSAMH	BPBLBPAADPPBB
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
N	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
O	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BPABPPPLLPBB
O	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	7	YDSSSRAT	BLLDPPPP
O	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	26	HQYSDISPT	BBDABABPB
P	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	13	AASGFTFRNSAMH	BPBLBPAADPPBB
P	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
P	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB
Q	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-2	8	RASQSVSSNYLA	BPABPPPLLPBB
Q	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	75	L2	8	L2-8-1	6	YDSSSRAT	BLLDPPPP
Q	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV	-1	L3	9	L3-9-2	27	HQYSDISPT	BBDABABPB
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	69.2	H1	13	H1-13-1	13	AASGFTFRNSAMH	BPBLBPAADPPBB
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70	H2	10	H2-10-*	-1	SIWYSGSNTY	BBBPPLBPPB
R	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV	-1	H3	12	H3-12-*	-1	ARFAGGWGAYDV	BPBDGADLGPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019