PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5DMG

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	76.9	H1	13	H1-13-1	19	TVSGFSLSSNAIN	BPBLBBAADBPBB
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	55.6	H2	9	H2-9-1	11	YIAVSGNTY	BBPAALPBB
C	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV	-1	H3	5	H3-5-*	-1	GKSNI	BBGAB
D	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	CDRLenMismatch	-1	L1	12	L1-12-2	30	QSSQSVRTNKLA	BBABPPPPLBBB
D	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	Rb_IGKV1S62*01	50	L2	8	L2-8-1	10	YSASTLDF	BLLDPPPP
D	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	Rb_IGKV	-1	L3	13	L3-13-*	-1	LGYFDCSIADCVA	BBPBPPLABPABB
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	76.9	H1	13	H1-13-1	24	TVSGFSLSSNAIN	BBBLBBAADBPBP
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	55.6	H2	9	H2-9-1	10	YIAVSGNTY	BBPAALPBB
E	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV	-1	H3	5	H3-5-*	-1	GKSNI	GBGAP
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	CDRLenMismatch	-1	L1	12	L1-12-2	31	QSSQSVRTNKLA	BPABPPPPLBBB
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	Rb_IGKV1S62*01	50	L2	8	L2-8-1	18	YSASTLDF	BLLDPPPP
F	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	Rb_IGKV	-1	L3	13	L3-13-cis8-*	-1	LGYFDCSIADCVA	BBPBPABbBPABB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	76.9	H1	13	H1-13-1	19	TVSGFSLSSNAIN	BPBLBBAADBPBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	55.6	H2	9	H2-9-1	14	YIAVSGNTY	BBPAALPPB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV	-1	H3	5	H3-5-*	-1	GKSNI	GBGAP
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	CDRLenMismatch	-1	L1	12	L1-12-2	35	QSSQSVRTNKLA	BPABPPPGBBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	Rb_IGKV1S62*01	50	L2	8	L2-8-1	7	YSASTLDF	BLLDPPPP
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S62*01	89.5	Rb_IGKV	-1	L3	13	L3-13-*	-1	LGYFDCSIADCVA	BBPBPPLDBPABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019