PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4WHY

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	76.9	H1	13	H1-13-1	12	AASGFTFSDSYLA	PBBLBPAADPPBB
G	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	50	H2	10	H2-10-2	16	SITNSGGRFY	BBPADLABBB
G	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV	-1	H3	5	H3-5-2	20	TRMDY	BDGAB
H	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	87.5	L1	16	L1-16-1	9	RSSQSLLESDGNTYLN	BBABPAPPAALBBPBB
H	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	75	L2	8	L2-8-1	9	YSVSNLES	BLGDPPPP
H	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV	-1	L3	8	L3-8-*	-1	MQTTHAPT	BBDABPPB
I	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	76.9	H1	13	H1-13-1	14	AASGFTFSDSYLA	PBBLBPAADPPBB
I	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	50	H2	10	H2-10-2	39	SITNSGGRFY	BBPADGLBBB
I	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV	-1	H3	5	H3-5-2	24	TRMDY	BDGAB
J	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	87.5	L1	16	L1-16-1	8	RSSQSLLESDGNTYLN	BBABPDPPAALBBPBB
J	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	75	L2	8	L2-8-1	6	YSVSNLES	BLLDPPPP
J	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV	-1	L3	8	L3-8-*	-1	MQTTHAPT	BBDABPPB
K	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	76.9	H1	13	H1-13-1	12	AASGFTFSDSYLA	PBBLBPAADPPBB
K	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	50	H2	10	H2-10-2	35	SITNSGGRFY	BBPABAABBB
K	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV	-1	H3	5	H3-5-2	25	TRMDY	BDGAB
L	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	87.5	L1	16	L1-16-1	15	RSSQSLLESDGNTYLN	BBAPPAPPAALBBPBB
L	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	75	L2	8	L2-8-1	6	YSVSNLES	BLLDPPPP
L	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV	-1	L3	8	L3-8-*	-1	MQTTHAPT	BBDABPPB
M	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	76.9	H1	13	H1-13-1	12	AASGFTFSDSYLA	PBBLBPAADPPBB
M	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV5-25*01	50	H2	10	H2-10-2	17	SITNSGGRFY	BBPADLABBB
M	heavy	Rattus.norvegicus	Ra_IGHV5-25*01	95.9	Ra_IGHV	-1	H3	5	H3-5-2	25	TRMDY	BDGAB
N	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	87.5	L1	16	L1-16-1	9	RSSQSLLESDGNTYLN	BBABPAPPAALBBPBB
N	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV2S25*01	75	L2	8	L2-8-1	6	YSVSNLES	BLLDPPPP
N	kappa	Rattus.norvegicus	Ra_IGKV2S25*01	94.2	Ra_IGKV	-1	L3	8	L3-8-*	-1	MQTTHAPT	BBDABPPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019