PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4TNV

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBBAAALPBB
F	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBBAAALPBB
G	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPBP
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBPAAALPBB
H	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDP
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBBAAALPBB
I	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDP
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBPAAALPBB
J	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPBP
K	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
K	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
K	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBGDBPB
L	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
L	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
L	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	39	ALWYSNHWV	BBPBGDBPB
M	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
M	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
M	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBLDBPB
N	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
N	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
N	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBGDBPB
O	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
O	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
O	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	34	ALWYSNHWV	BBPBGDBPB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBBAAALPBB
U	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBPAAALPBB
V	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDP
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	16	LINPYNGGTS	BBBAAALPBB
W	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPBP
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBBAAALPBB
X	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	92.3	H1	13	H1-13-1	17	KASGYSFTGYTMN	PBBLBPAAAPPBB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV1-37*01	70	H2	10	H2-10-1	15	LINPYNGGTS	BBPAAALPBB
Y	heavy	Mus.musculus	Mo_IGHV1-37*01	93.2	Mo_IGHV	-1	H3	15	H3-15-*	-1	ARDGDYYRYGRYFDY	BPPDBPLBPALBPDP
Z	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
Z	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
Z	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBGDBPB
f	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
f	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
f	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBGDBPB
g	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
g	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
g	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBGDBPB
h	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
h	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
h	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBGDBPB
i	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	85.7	L1	14	L1-14-1	11	RSSTGAVTTINFAN	PPAABPPPAAALPB
i	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV1*01	87.5	L2	8	L2-8-4	24	GGINNRAP	BGADPBPP
i	lambda	Mus.musculus	Mo_IGLV1*01	100	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBPBLDBPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019