PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3VRL

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV5-6-4*01	98.6	Mo_IGHV5-6-4*01	100	H1	13	H1-13-1	13	AASGFTFSSYTMS	BPBLBPAAABPBB
E	heavy	Mus.musculus	Mo_IGHV5-6-4*01	98.6	Mo_IGHV5-6-4*01	90	H2	10	H2-10-2	17	IISSGGSYTY	BBPAALABBB
E	heavy	Mus.musculus	Mo_IGHV5-6-4*01	98.6	Mo_IGHV	-1	H3	15	H3-15-*	-1	TRDEGNGNYVEAMDY	BBPPDDPABPDBPAB
F	kappa	Mus.musculus	Mo_IGKV12-41*01	100	Mo_IGKV12-41*01	100	L1	11	L1-11-2	17	RASGNIHNYLA	BPABPALLPBB
F	kappa	Mus.musculus	Mo_IGKV12-41*01	100	Mo_IGKV12-41*01	100	L2	8	L2-8-1	14	YNAKTLAD	BLLDPPPP
F	kappa	Mus.musculus	Mo_IGKV12-41*01	100	Mo_IGKV	-1	L3	9	L3-9-2	28	QHFWSTPRT	BBDABAPBP
H	heavy	Mus.musculus	Mo_IGHV5-6-4*01	98.6	Mo_IGHV5-6-4*01	100	H1	13	H1-13-1	11	AASGFTFSSYTMS	PPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV5-6-4*01	98.6	Mo_IGHV5-6-4*01	90	H2	10	H2-10-2	18	IISSGGSYTY	BBPAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-6-4*01	98.6	Mo_IGHV	-1	H3	15	H3-15-*	-1	TRDEGNGNYVEAMDY	BBPPADPAPPDBPGB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100	Mo_IGKV12-41*01	100	L1	11	L1-11-2	12	RASGNIHNYLA	BPABPDLLPBB
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100	Mo_IGKV12-41*01	100	L2	8	L2-8-1	14	YNAKTLAD	BLLDPPPP
L	kappa	Mus.musculus	Mo_IGKV12-41*01	100	Mo_IGKV	-1	L3	9	L3-9-2	22	QHFWSTPRT	BBDAPAPPP

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019