PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3CFD

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100	L1	11	L1-11-2	9	RASQDISNYLN	BBABPDLLPBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100	L2	8	L2-8-1	7	YYTSRLHS	BLGDPPPP
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQGTTLPPT	BPDABPpPB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	7	TVTGYSITSDYAWN	PBBLBPAAABGBBB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	8	YISYSGRIR	BBPADLPBB
B	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV	-1	H3	13	H3-13-*	-1	ARSDYGNYGRGDY	BPBPPGGALBPAB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	6	TVTGYSITSDYAWN	PBBLBBAAABGBBB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	7	YISYSGRIR	BBPADLPBB
H	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV	-1	H3	13	H3-13-*	-1	ARSDYGNYGRGDY	BPBPPGGALPPAB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100	L1	11	L1-11-2	9	RASQDISNYLN	BBABPDLLPBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100	L2	8	L2-8-1	7	YYTSRLHS	BLGDPPPP
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQGTTLPPT	BPDDBPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019