PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1RZI

#CDRs = 5; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	22	RASQSISSYLN	PBABPDGDBBB
A	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	16	YAASSLQS	BLGDBPPP
A	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-2	25	QQSYSTSHT	BPDDPABPB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-*	-1	KASGGTFSSYAIS	PBBDBPDGAPPPB
B	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-1	27	GIIPVFGSAN	BBBAADLPBB
C	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	23	RASQSISSYLN	PPABPDGDAPB
C	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	27	YAASSLQS	BLGAPPBP
C	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-2	31	QQSYSTSHT	BPDDPABPB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-1	36	KASGGTFSSYAIS	BPBLBPAADBPPB
D	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-*	-1	GIIPVFGSAN	BBBAAPPBPB
E	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	23	RASQSISSYLN	BPABPDGBDBB
E	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	20	YAASSLQS	BLGAPPPP
E	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-2	29	QQSYSTSHT	BPDAPABPB
F	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-*	-1	KASGGTFSSYAIS	PAPBABAAAPBPB
F	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-*	-1	GIIPVFGSAN	BBBAABPDGP
G	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	19	RASQSISSYLN	PBABPDGDDBB
G	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	18	YAASSLQS	BLLDPPPP
G	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-2	35	QQSYSTSHT	BBDAPAPPB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-1	31	KASGGTFSSYAIS	PBPLBPPAABPPB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-*	-1	GIIPVFGSAN	BBPAABABPP
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	14	RASQSISSYLN	BPABPDGDPBB
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	23	YAASSLQS	BLLDPPPP
I	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSYSTSHT	BBAAPAPBP
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-1	27	KASGGTFSSYAIS	BPBLBBAAABPPB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-*	-1	GIIPVFGSAN	BBBADBDPBP
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	28	RASQSISSYLN	BBABBDGDAPB
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	26	YAASSLQS	BLGDPPPP
K	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-2	34	QQSYSTSHT	BBDAPDPPP
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-*	-1	KASGGTFSSYAIS	PPBLBDAAAPBPB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-9	31	GIIPVFGSAN	BBBAABPGBP
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	20	RASQSISSYLN	BPABPAGDAPB
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	11	YAASSLQS	BLLDPPPP
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQSYSTSHT	BBDDPDBPP
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-*	-1	KASGGTFSSYAIS	PPPLBPAAAPPPB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-*	-1	GIIPVFGSAN	BBPPLBPBBP
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L1	11	L1-11-1	12	RASQSISSYLN	BPABPDGDPBB
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV1D-39*01	100	L2	8	L2-8-1	13	YAASSLQS	BLLDBPPP
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	97.1	Hu_IGKV	-1	L3	9	L3-9-2	34	QQSYSTSHT	BPDAPAPPP
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	100	H1	13	H1-13-*	-1	KASGGTFSSYAIS	BPBGGBAAAPPPB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	94.5	Hu_IGHV1-69*01	80	H2	10	H2-10-9	33	GIIPVFGSAN	BBBAABPBPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019