PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1FSK

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	81.8	L1	11	L1-11-1	17	KASENVDTYVF	BPABPDGDABB
B	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	87.5	L2	8	L2-8-*	-1	YGPSNRYT	PGPLBPPP
B	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	GQSYSYPYT	BBDABPpPB
C	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	100	H1	13	H1-13-1	14	KASGYTFTSYWIN	BPBLBPAAABPBB
C	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	70	H2	10	H2-10-3	24	NIFPSDSYTN	BBPPGDLPBB
C	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRGARDTWFAY	BBPBPLBBLAB
E	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	81.8	L1	11	L1-11-1	17	KASENVDTYVF	BPABPDGDABB
E	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	87.5	L2	8	L2-8-*	-1	YGPSNRYT	PGPLBPPP
E	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	GQSYSYPYT	BBDABPpPB
F	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	100	H1	13	H1-13-1	14	KASGYTFTSYWIN	BPBLBPAAABPBB
F	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	70	H2	10	H2-10-3	24	NIFPSDSYTN	BBPPGDLPBB
F	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRGARDTWFAY	BBPBPLBBLAB
H	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	81.8	L1	11	L1-11-1	17	KASENVDTYVF	BPABPDGDABB
H	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	87.5	L2	8	L2-8-*	-1	YGPSNRYT	PGPLBPPP
H	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	GQSYSYPYT	BBDABPpPB
I	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	100	H1	13	H1-13-1	14	KASGYTFTSYWIN	BPBLBPAAABPBB
I	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	70	H2	10	H2-10-3	24	NIFPSDSYTN	BBPPGDLPBB
I	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRGARDTWFAY	BBPBPLBBLAB
K	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	81.8	L1	11	L1-11-1	17	KASENVDTYVF	BPABPDGDABB
K	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV6-20*01	87.5	L2	8	L2-8-*	-1	YGPSNRYT	PGPLBPPP
K	kappa	Mus.musculus	Mo_IGKV6-20*01	91.3	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	GQSYSYPYT	BBDABPpPB
L	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	100	H1	13	H1-13-1	14	KASGYTFTSYWIN	BPBLBPAAABPBB
L	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV1S70*01	70	H2	10	H2-10-3	24	NIFPSDSYTN	BBPPGDLPBB
L	heavy	Mus.musculus	Mo_IGHV1S70*01	90.4	Mo_IGHV	-1	H3	11	H3-11-*	-1	TRGARDTWFAY	BBPBPLBBLAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019