PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 4HG4

#CDRs = 6; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-4	38	KASGGTFITHVFT	BBBLBPAPGLBPB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	18	GFIAIFGTSN	BBBAAALPBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBBBLGALPBBAP
K	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	12	QASQDIRKYLN	BPABPDGDBBB
K	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-*	-1	YDASNVKT	BLLLBBPP
K	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPDALP
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	27	KASGGTFITHVFT	PPBLBPAAAPBBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	15	GFIAIFGTSN	BBPAADLPBB
L	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-cis13-*	-1	ARGISGSYGWFDP	BPBBGADLPPBBb
M	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	12	QASQDIRKYLN	BPABPDGAPBB
M	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	13	YDASNVKT	BLGDPPPP
M	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BPBGPBDGB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	22	KASGGTFITHVFT	PBBLBPAAAPBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	18	GFIAIFGTSN	BBBAADLBBB
N	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-cis13-*	-1	ARGISGSYGWFDP	BPBBGADGPBBBp
O	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABPDGAPBB
O	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	13	YDASNVKT	BLLDPPPP
O	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGBBDGB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	23	KASGGTFITHVFT	BPBLBPAAAPBPB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	16	GFIAIFGTSN	BBPAADLPBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BPPBGADLPBPDP
Q	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	14	QASQDIRKYLN	BPABPDGAABB
Q	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	18	YDASNVKT	BLLDPBPP
Q	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPBDLB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	24	KASGGTFITHVFT	BPBLBPAAAPBPB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	17	GFIAIFGTSN	BBPAAALPBB
R	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BPBBGDAGABBDP
S	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABPDGDPBB
S	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	14	YDASNVKT	BLGDPBPP
S	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPBALB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	25	KASGGTFITHVFT	PPBLBPAAAPBPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	16	GFIAIFGTSN	BBBAAALPBB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BPPBGDAGPBPAP
U	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	12	QASQDIRKYLN	BBABPDGAPBB
U	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	14	YDASNVKT	BLGDPBPP
U	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPBDGB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	27	KASGGTFITHVFT	BPBLBPAAAPBPB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	17	GFIAIFGTSN	BBPAAALPBB
V	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BPPBGDDLABBAP
W	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABPDGDPBB
W	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	18	YDASNVKT	BLGDPBPP
W	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPBALB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	34	KASGGTFITHVFT	BBPGBPAAAPBPB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	13	GFIAIFGTSN	BBBAADLPBB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BPPBGADLPPBDP
Y	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABPDGDABB
Y	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	16	YDASNVKT	BLGDPBPP
Y	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPBALB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	53.8	H1	13	H1-13-1	36	KASGGTFITHVFT	BBPGBPAAAPBPB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	15	GFIAIFGTSN	BBBAADLPBB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARGISGSYGWFDP	BBPPGAALABBAB
z	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	81.8	L1	11	L1-11-1	11	QASQDIRKYLN	BBABPDGAPBB
z	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV1D-33*01	75	L2	8	L2-8-1	21	YDASNVKT	BLLDPBPP
z	kappa	Homo.sapiens	Hu_IGKV1D-33*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYDNLPIT	BBBGPBDGB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019