PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6DFI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	90.4	Hu_IGHV4-59*01	84.6	H1	13	H1-13-*	-1	TVSGGSIDTYYWS	BBBLBBAABEBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	90.4	Hu_IGHV4-59*01	33.3	H2	9	H2-9-*	-1	CFYYSVDNH	BBBBLABBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	90.4	Hu_IGHV4-59*01	100.0	H3	12	H3-12-3	15	ARNQPGGRAFDY	BBBBBLBABBAB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	90.4	Hu_IGHV4-59*01	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	81.8	L1	11	L1-11-*	-1	RASQSVSNYFA	BBABBABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	75.0	L2	8	L2-8-1	6	YDTSKRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	71.4	L3	11	L3-11-*	-1	QERNNWPltWT	BBBBABbBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022