PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SHZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	6	AVSGYSITSgYSWN	BBBLBBAAAEEBBB
C	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	8	SIKYSGETK	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-2	9	ARGSHYFGHWHFAV	BBBBBBLLBBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	75.0	H4	8	H4-8-1	8	RDDSKNTF	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	60.0	L1	15	L1-15-1	8	RASKPVDgegdSYLN	BBABBABBLLBBBBB
D	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	5	YAASYLES	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	7	QQSHEDPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	6	AVSGYSITSgYSWN	BBBLBBAAAEEBBB
E	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	8	SIKYSGETK	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-2	9	ARGSHYFGHWHFAV	BBBBBBLLBBBBAB
E	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	75.0	H4	8	H4-8-1	8	RDDSKNTF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	60.0	L1	15	L1-15-1	8	RASKPVDgegdSYLN	BBABBABBLLBBBBB
F	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	5	YAASYLES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	7	QQSHEDPYT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	5	AVSGYSITSgYSWN	BBBLBBAAAEEBBB
I	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	8	SIKYSGETK	BBBAALBBB
I	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-2	9	ARGSHYFGHWHFAV	BBBBBBLLBBBBAB
I	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	75.0	H4	8	H4-8-1	7	RDDSKNTF	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	60.0	L1	15	L1-15-1	8	RASKPVDgegdSYLN	BBABBABBLLBBBBB
J	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	5	YAASYLES	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	7	QQSHEDPYT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	78.6	H1	14	H1-14-1	5	AVSGYSITSgYSWN	BBBLBBAAAEEBBB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Mo_IGHV3-1*02	55.6	H2	9	H2-9-1	8	SIKYSGETK	BBBAALBBB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	100.0	H3	14	H3-14-2	8	ARGSHYFGHWHFAV	BBBBBBLLBBBBAB
K	heavy	Homo.sapiens	Hu_IGHV3-66*01	90.4	Hu_IGHV3-66*01	75.0	H4	8	H4-8-1	9	RDDSKNTF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	60.0	L1	15	L1-15-1	8	RASKPVDgegdSYLN	BBABBABBLLBBBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	5	YAASYLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	42.9	L3	9	L3-9-cis7-1	7	QQSHEDPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	100.0	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022