PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ZYK

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	84.6	H1	13	H1-13-1	9	AASGFSFSHYAMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	80.0	H2	10	H2-10-2	6	VISYDGENTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	100.0	H3	16	H3-16-*	-1	ARDRIVddYYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	87.5	H4	8	H4-8-1	6	RDNSKNTV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDIKKYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	9	HDASNLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	100.0	L3	10	L3-10-*	-1	QQYDNlpPLT	BBABEBBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	84.6	H1	13	H1-13-1	9	AASGFSFSHYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	80.0	H2	10	H2-10-2	3	VISYDGENTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	100.0	H3	16	H3-16-*	-1	ARDRIVddyYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-30*09	91.8	Hu_IGHV3-30*09	87.5	H4	8	H4-8-1	12	RDNSKNTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	4	QASQDIKKYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	7	HDASNLET	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	100.0	L3	10	L3-10-cis78-1	14	QQYDNlpPLT	BBAABBbbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	89.9	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022