PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 5MV4

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
A	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYGISSMN	BPABPAPBLLBPPBB
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
B	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
C	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYGISSMN	BPABPAPBLLBPPBB
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
D	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
F	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYGISSMN	BPABPAPBLLBPPBB
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
G	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
I	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYGISSMN	BPABPAPBLLBPPBB
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
J	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQSKGVPYT	BBDABPpPB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
L	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYGISSMN	BPABPAPBLLBPPBB
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
M	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
O	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	10	RASESVDNYGISSMN	BPABPAPBLLBPPBB
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
P	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
R	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYGISSMN	BPABPAPBLLBPPBB
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
S	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	100	H1	13	H1-13-1	14	AASGFTFSDAWMD	BBBLBPAAAPPBB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV6-6*01	83.3	H2	12	H2-12-1	9	EIRNKVNNHATN	BBPPAAALLPBB
U	heavy	Mus.musculus	Mo_IGHV6-6*01	93.2	Mo_IGHV	-1	H3	7	H3-7-*	-1	TGLTFDY	BBLGDAB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	93.3	L1	15	L1-15-1	9	RASESVDNYGISSMN	BPABPAPBLLBPPBB
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV3-2*01	87.5	L2	8	L2-8-1	7	YAASKQGS	BLLDPPPP
V	kappa	Mus.musculus	Mo_IGKV3-2*01	92.8	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	QQSKGVPYT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019