PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3SKJ

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	13	AASGFTFSHYMMA	BPBLBPAAAPPBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV3-23*01	50	H2	10	H2-10-2	27	RIGPSGGPTH	BBPAALPPBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGYDSGYDYVAVAGPAEYFQH	BBBBAADBPBABPPAPBBBAB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	12	AASGFTFSHYMMA	PBBLBPAAABPBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV3-23*01	50	H2	10	H2-10-6	37	RIGPSGGPTH	BBPAALGPBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV	-1	H3	21	H3-21-*	-1	AGYDSGYDYVAVAGPAEYFQH	BBBBAADBPBABPPABBBBAB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	9	RASQSISTWLA	BBABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	25	YKASNLHT	BLLLPPPP
L	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYNSYSRT	BPDABAALP
M	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	90.9	L1	11	L1-11-1	8	RASQSISTWLA	BPABPDGAPBB
M	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	15	YKASNLHT	BLLDPPPP
M	kappa	Homo.sapiens	Hu_IGKV1-5*01	95.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QQYNSYSRT	BPDABAALP

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019