Protein Common Interface Database

Clusters with M>=20,SeqId<90 and pair Pfam Architecture

Pfam Architecture	Cluster#	#CFs/Cluster	#Entries/Cluster	#CFs/Group	#Entries/Group	Minimum Seq Identity	Surface Area	In PDBBA(%)	In PISABA(%)	CFs Cluster/Group(%)
(Ribosomal_L13);(Ribosomal_L20)	1	215	361	218	372	10	524	99	20	99
(Ribosomal_L13);(Ribosomal_L3)	1	93	107	109	183	10	407	32	8	85
(Ribosomal_L14);(Ribosomal_L19)	1	210	357	226	380	0	802	99	18	93
(Ribosomal_L14);(Ribosomal_L3)	1	113	187	120	194	10	416	59	9	94
(Ribosomal_L16);(Ribosomal_L27)	1	44	101	52	121	22	270	97	4	85
(Ribosomal_L17);(Ribosomal_L32p)	1	204	349	217	367	0	354	99	17	94
(Ribosomal_L19);(Ribosomal_L3)	1	204	350	219	373	0	717	98	18	93
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L9_N)_(Ribosomal_ L9_C)	1	23	23	59	72	40	225	100	52	39
(Ribosomal_L20);(Ribosomal_L21p)	1	221	371	223	378	10	967	99	18	99
(Ribosomal_L22);(Ribosomal_L32p)	1	209	359	221	376	2	464	99	19	95
(Ribosomal_L23);(Ribosomal_L29)	1	215	421	225	440	0	486	99	15	96
(Ribosomal_L27A);(Ribosomal_L35p)	1	202	342	220	373	0	786	98	17	92
(Ribosomal_L27A);(Ribosomal_L4)	1	180	299	220	373	2	460	98	21	82
(Ribosomal_L27A);(Ribosomal_L4)	2	22	31	220	373	10	430	100	0	10
(Ribosomal_L31);(Ribosomal_L5)_(Ribosomal_L5_C)	1	102	201	131	240	7	971	99	17	78
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L29)	1	101	115	104	118	2	756	37	12	97
(DSS1_SEM1);(RPN7)_(PCI)	1	22	22	31	31	10	729	100	68	71
(JAB);(JAB)_(MitMem_reg)	1	28	30	36	39	19	2989	100	77	78
(JAB)_(MitMem_reg);(RPN7)_(PCI)	1	22	23	33	34	10	468	100	39	67
(JAB)_(MitMem_reg);(VWA_2)	1	24	24	24	24	48	640	100	54	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L13)	1	62	76	92	106	10	767	25	4	67
(KOW)_(Ribosomal_L14e);(Ribosomal_L13)	2	29	29	92	106	5	689	45	28	32
(KOW)_(Ribosomal_L14e);(Ribosomal_L18A)	1	93	107	95	109	1	955	33	11	98
(KOW)_(Ribosomal_L14e);(Ribosomal_L6)_(Ribosomal_L6)	1	73	87	75	89	10	459	29	14	97
(Ribosomal_L10);(Ribosomal_L11_N)_(Ribosomal_L11)	1	28	28	38	38	10	278	100	32	74
(Ribosomal_L13);(Ribosomal_L18A)	1	70	84	94	108	15	681	27	4	74
(Ribosomal_L13);(Ribosomal_L35Ae)	1	57	59	77	91	10	241	29	5	74
(Ribosomal_L14);(Ribosomal_L24e)	1	114	188	119	194	0	513	60	9	96
(Ribosomal_L15e);(Ribosomal_L29)	1	98	112	98	112	20	355	35	11	100
(Ribosomal_L15e);(Ribosomal_L7Ae)	1	112	186	112	186	3	919	59	7	100
(Ribosomal_L18);(Ribosomal_L27A)	1	97	111	100	114	10	888	35	10	97
(Ribosomal_L18A);(Ribosomal_L21e)	1	94	108	94	108	1	897	33	10	100
(Ribosomal_L18A);(Ribosomal_L6)_(Ribosomal_L6)	1	92	106	95	109	10	303	33	11	97
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L37ae)	1	106	180	108	182	10	1219	59	6	98
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L7Ae)	1	91	105	91	105	10	300	32	10	100
(Ribosomal_L21e);(Ribosomal_L5e)_(Ribosomal_L18_c)	1	96	110	100	114	10	848	32	8	96
(Ribosomal_L24e);(Ribosomal_L3)	1	98	112	104	118	0	599	33	12	94
(Ribosomal_L29);(Ribosomal_L37e)	1	23	23	23	23	38	206	39	4	100
(Ribosomal_L34e);(Ribosomal_L7Ae)	1	95	109	99	113	10	263	33	10	96
(Ribosomal_L37e);(Ribosomal_L39)	1	75	89	78	92	39	230	28	11	96
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_L5e)_(Ribosomal_L 18_c)	1	91	105	95	109	10	244	30	10	96
(DNA_RNApol_7kD);(RNA_pol_A_bac)	1	70	176	70	207	20	575	100	63	100
(DNA_RNApol_7kD);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_ Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_( RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	55	162	55	193	16	1008	100	62	100
(RNA_pol_A_bac);(RNA_pol_L_2)	1	70	176	70	207	4	2036	100	73	100
(RNA_pol_A_bac);(RNA_pol_N)	1	70	176	70	207	20	1110	100	83	100
(RNA_pol_A_bac);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_R pb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(R NA_pol_Rpb1_5)_(RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5)	1	27	110	31	164	49	359	100	73	87
(RNA_pol_A_bac);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_R pb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(R NA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	52	154	52	185	22	1703	100	84	100
(RNA_pol_L_2);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb 1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA _pol_Rpb1_5)_(RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5)	1	41	143	41	174	35	963	100	57	100
(RNA_pol_L_2);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb 2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(RNA _pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	48	153	55	193	23	446	100	73	87
(RNA_POL_M_15KD)_(TFIIS_C);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2) _(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol _Rpb1_6)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5)	1	42	144	42	175	44	1550	100	81	100
(RNA_POL_M_15KD)_(TFIIS_C);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2) _(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol _Rpb2_5)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	41	143	52	185	44	1379	100	68	79
(RNA_pol_N);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_ 1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(RNA_p ol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	55	162	55	193	37	1535	100	84	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_1)_(RNA_pol_R pb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(R NA_pol_Rpb2_5)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	39	141	41	174	53	9130	100	72	95
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb5_N)_(RNA_pol_R pb5_C)	1	42	144	42	175	42	2104	100	81	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb6)	1	41	143	42	175	53	1904	100	80	98
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb8)	1	41	143	42	175	29	1469	100	80	98
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(SHS2_Rpb7-N)_(S1)	1	34	84	35	108	10	596	100	58	97
(RNA_pol_Rpb4);(SHS2_Rpb7-N)_(S1)	1	40	94	42	120	2	2082	100	59	95
(RNA_pol_Rpb6);(SHS2_Rpb7-N)_(S1)	1	37	91	38	116	17	449	99	55	97
(Kinesin);(Tubulin)_(Tubulin_C)	1	24	24	41	41	28	600	96	29	59
(Kinesin);(Tubulin)_(Tubulin_C)	2	23	23	41	41	28	654	96	30	56
(Thrombin_light);(Trypsin)	1	96	359	98	430	10	1162	100	99	98
(Thrombin_light);(Trypsin)	2	20	33	98	430	74	265	3	15	20
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S10)	1	207	422	312	571	1	406	99	19	66
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S10)	2	96	110	312	571	10	477	33	8	31
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S14)	1	209	437	312	571	0	865	100	20	67
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S14)	2	98	112	312	571	10	411	32	8	31
(Ribosom_S12_S23);(Ribosomal_S17)	1	181	388	198	441	10	221	99	25	91
(Ribosomal_L28);(Ribosomal_L9_N)_(Ribosomal_L9_C)	1	81	106	142	266	0	273	98	25	57
(Ribosomal_L28);(Ribosomal_L9_N)_(Ribosomal_L9_C)	2	33	125	142	266	10	218	100	6	23
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	1	93	144	179	299	10	305	100	22	52
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	2	25	25	179	299	59	290	4	0	14
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S19)	1	26	40	26	40	24	270	15	5	100
(Ribosomal_S10);(Ribosomal_S14)	1	218	444	321	580	0	801	98	22	68
(Ribosomal_S10);(Ribosomal_S14)	2	102	116	321	580	0	750	34	9	32
(Ribosomal_S11);(Ribosomal_S18)	1	89	280	115	338	10	312	100	8	77
(Ribosomal_S11);(Ribosomal_S21)	1	111	135	129	157	0	1038	97	23	86
(Ribosomal_S11);(Ribosomal_S7)	1	166	357	195	428	10	243	99	22	85
(Ribosomal_S13);(Ribosomal_S19)	1	311	548	320	579	0	440	86	13	97
(Ribosomal_S14);(Ribosomal_S19)	1	105	132	123	151	10	306	98	23	85
(Ribosomal_S18);(Ribosomal_S21)	1	65	88	101	128	10	251	95	20	64
(Ribosomal_S18);(Ribosomal_S6)	1	212	435	223	468	0	929	99	14	95
(Ribosomal_S4)_(S4);(Ribosomal_S5)_(Ribosomal_S5_C)	1	166	384	264	523	10	324	99	23	63
(Ribosomal_S4)_(S4);(Ribosomal_S5)_(Ribosomal_S5_C)	2	58	72	264	523	37	367	29	10	22
(Ribosomal_S5)_(Ribosomal_S5_C);(Ribosomal_S8)	1	201	419	325	584	1	574	99	20	62
(Ribosomal_S5)_(Ribosomal_S5_C);(Ribosomal_S8)	2	105	119	325	584	10	544	34	10	32
(Ribosomal_S7);(Ribosomal_S9)	1	260	465	293	528	0	453	84	16	89
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)	1	24	53	25	55	10	497	100	91	96
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)	2	21	50	25	55	23	514	100	94	84
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)	3	21	51	25	55	31	569	100	90	84
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C)	1	22	52	25	55	10	580	100	90	88
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C)	2	20	50	25	55	23	253	100	90	80
(ATP-synt);(ATP-synt_Eps)	1	24	37	24	37	10	795	100	84	100
(ATP-synt_ab_N)_(ATP-synt_ab);(ATP-synt_ab_N)_(ATP-synt_ab)_ (ATP-synt_ab_C)	1	39	70	42	73	18	1982	100	87	93
(Histone);(Histone)_(Histone_H2A_C)	1	42	127	49	187	10	2495	100	93	86
(Histone);(Histone)_(Histone_H2A_C)	2	39	168	49	187	42	673	99	95	80
(Ribosomal_L7Ae);(Ribosomal_S13_N)_(Ribosomal_S15)	1	30	30	36	36	10	370	3	0	83
(Ribosomal_S11);(Ribosomal_S28e)	1	36	36	43	43	46	303	31	6	84
(Ribosomal_S11);(Ribosomal_S3Ae)	1	92	106	102	116	10	867	39	10	90
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S7e)	1	26	26	31	31	31	230	42	19	84
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S8)	1	40	42	41	43	10	210	33	14	98
(Ribosomal_S17_N)_(Ribosomal_S17);(Ribosomal_S8e)	1	101	115	101	115	10	738	37	10	100
(Ribosomal_S24e);(Ribosomal_S4)_(S4)	1	53	67	54	68	10	234	28	7	98
(Ribosomal_S28e);(Ribosomal_S7)	1	103	117	105	119	10	1143	36	9	98
(Ribosomal_S7e);(Ribosomal_S8)	1	100	114	100	114	10	467	36	10	100
(V-set)_(C1-set);(V-set)_(DUF1968)	1	179	309	184	324	10	2037	100	98	97
(MHC_II_beta)_(C1-set);(V-set)_(DUF1968)	1	28	32	31	41	20	354	97	25	90
(MHC_II_alpha)_(C1-set);(V-set)_(C1-set)	1	23	31	31	41	10	343	94	26	74
(Synaptobrevin);(Syntaxin)_(SNARE)	1	20	24	20	25	4	1372	100	83	100
(Pico_P1A);(Rhv)	1	43	127	47	135	10	1013	100	65	91
(Pico_P1A);(Rhv)	2	36	120	47	135	10	809	100	62	77
(Pico_P1A);(Rhv)	3	33	104	47	135	28	533	100	60	70
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2 _3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	26	59	26	59	10	1937	100	90	100
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2 _3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	2	24	56	26	59	10	257	100	95	92
(Cyclin_N)_(Cyclin_C);(Pkinase)	1	22	80	23	119	10	1533	99	98	96
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1 _4)_(RNA_pol_Rpb1_5)	1	21	37	25	49	44	942	100	81	84
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb6)	1	55	89	67	101	12	1524	100	90	82
(Ribosomal_L16);(Ribosomal_L25p)_(Ribosomal_TL5_C)	1	67	177	81	208	10	1130	100	9	83
(Ribosomal_L31);(Ribosomal_S13)	1	75	169	96	199	10	409	100	18	78
(Ribosomal_L31);(Ribosomal_S19)	1	66	138	94	183	10	435	100	24	70
(RNA_pol_I_A49);(RNA_polI_A34)	1	20	24	20	24	38	2165	100	79	100
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S17e)	1	91	105	91	105	8	492	30	7	100
(KH_2)_(Ribosomal_S3_C);(S10_plectin)	1	91	105	91	105	3	885	31	8	100
(KH_2)_(Ribosomal_S3_C);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)_(WD40)	1	39	53	39	53	10	480	19	8	100
(Ribosom_S12_S23);(Ribosomal_S17_N)_(Ribosomal_S17)	1	102	116	102	116	7	465	33	11	100
(Ribosom_S12_S23);(Ribosomal_S30)	1	81	95	82	96	10	479	35	9	99
(Ribosomal_L16);(Ribosomal_L21e)	1	42	55	47	61	10	215	25	13	89
(Ribosomal_L16);(Ribosomal_L5e)_(Ribosomal_L18_c)	1	71	85	76	90	10	262	26	7	93
(Ribosomal_L24e);(Ribosomal_S6e)	1	40	54	43	57	10	809	15	4	93
(Ribosomal_L40e);(Ribosomal_L6)_(Ribosomal_L6)	1	43	57	43	57	35	665	26	9	100
(Ribosomal_L7Ae);(Ribosomal_S27)	1	34	48	38	52	10	509	25	10	89
(Ribosomal_S11);(Ribosomal_S26e)	1	94	108	94	108	10	1106	31	8	100
(Ribosomal_S13);(Ribosomal_S19e)	1	95	109	100	114	2	440	33	10	95
(Ribosomal_S13);(Ribosomal_S25)	1	86	100	91	105	10	468	33	9	95
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S27e)	1	101	115	103	117	8	716	35	10	98
(Ribosomal_S14);(S10_plectin)	1	88	102	90	104	10	288	31	7	98
(Ribosomal_S17e);(Ribosomal_S2)_(40S_SA_C)	1	79	93	86	100	10	1006	27	9	92
(Ribosomal_S17e);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)	1	43	57	43	57	10	538	21	9	100
(Ribosomal_S19e);(Ribosomal_S9)	1	52	52	58	58	3	298	33	12	90
(Ribosomal_S2)_(40S_SA_C);(Ribosomal_S21e)	1	88	102	88	102	10	1524	28	9	100
(Ribosomal_S2)_(40S_SA_C);(Ribosomal_S5)_(Ribosomal_S5_C)	1	88	102	88	102	10	544	28	9	100
(Ribosomal_S21e);(Ribosomal_S27e)	1	49	63	49	63	39	437	30	10	100
(Ribosomal_S21e);(Ribosomal_S5)_(Ribosomal_S5_C)	1	96	110	96	110	10	1325	33	10	100
(Ribosomal_S21e);(Ribosomal_S8)	1	83	97	84	98	10	279	33	10	99
(Ribosomal_S24e);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_ C)	1	94	108	99	113	5	541	33	10	95
(Ribosomal_S25);(Ribosomal_S7)	1	88	102	95	109	5	609	33	10	93
(Ribosomal_S26e);(Ribosomal_S3Ae)	1	76	90	82	96	10	271	32	7	93
(Ribosomal_S27e);(Ribosomal_S7e)	1	35	35	37	37	31	365	31	9	95
(Ribosomal_S27e);(Ribosomal_S8)	1	100	114	100	114	10	487	34	10	100
(Ribosomal_S30);(Ribosomal_S4)_(S4)	1	57	71	57	71	5	506	30	10	100
(Ribosomal_S4)_(S4);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_ S4_C)	1	50	64	50	64	10	387	25	11	100
(Ribosomal_S6e);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_C )	1	91	105	91	105	5	314	31	10	100
(Ribosomal_S9);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD 40)	1	43	57	45	59	36	314	21	7	96
(Ribosomal_L6)_(Ribosomal_L6);(ubiquitin)_(Ribosomal_L40e)	1	42	42	50	50	35	632	43	17	84
(KH_2)_(Ribosomal_S3_C);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)	1	37	37	41	41	10	494	43	11	90
(Ribosomal_L7Ae);(ubiquitin)_(Ribosomal_S27)	1	44	44	47	47	10	586	41	5	94
(Ribosomal_S17e);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	45	45	45	45	10	548	44	9	100
(Ribosomal_S30);(S4)	1	24	24	24	24	10	489	50	12	100
(Ribosomal_S5)_(Ribosomal_S5_C);(S4)	1	40	40	43	43	10	375	40	8	93
(Ribosomal_S9);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	41	41	41	41	10	289	49	10	100
(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_C);(S4)	1	40	40	40	40	10	353	40	8	100
(Ig_3)_(C1-set);(V-set)_(C1-set)	1	22	29	22	29	19	1692	100	93	100
(Flavi_glycoprot)_(Flavi_glycop_C);(Flavi_M)	1	20	20	21	21	24	865	100	10	95
(GP120);(V-set)_(C1-set)	1	34	61	115	174	10	914	98	61	30
(GP120);(GP41)	1	21	32	21	32	71	2451	97	59	100
(Kunitz_BPTI);(Trypsin)	1	36	90	37	91	16	677	100	99	97
(MHC_II_alpha)_(C1-set);(MHC_II_beta)_(C1-set)	1	113	158	115	161	10	2632	100	99	98
(MHC_II_alpha)_(C1-set);(MHC_II_beta)_(C1-set)	2	20	22	115	161	21	379	14	14	17
(NiFeSe_Hases);(Oxidored_q6)_(NiFe_hyd_SSU_C)	1	22	64	23	85	10	3624	100	100	96
(CBFD_NFYB_HMF);(Histone)	1	45	164	45	177	14	2446	100	97	100
(CBFD_NFYB_HMF);(Histone)_(Histone_H2A_C)	1	25	140	26	150	12	423	99	96	96
(C1-set);(MHC_I)_(Ig_3)	1	273	535	274	560	22	1284	99	97	100
(C1-set);(MHC_I)_(Ig_3)	2	33	84	274	560	83	259	0	0	12
(C1-set);(MHC_I)_(Ig_3)	3	21	38	274	560	72	342	3	11	8
(C1-set);(MHC_I)_(Ig_3)	4	21	38	274	560	72	334	3	0	8
(C1-set);(MHC_I)_(Ig_3)	5	20	63	274	560	19	261	0	2	7
(C1-set);(MHC_I)_(Ig_3)	6	20	28	274	560	41	267	0	11	7
(MHC_I)_(Ig_3);(V-set)_(C1-set)	1	39	61	56	85	53	414	100	49	70
(C1-set);(MHC_I)_(C1-set)	1	140	226	145	242	10	1259	100	98	97
(Cytochrom_C1);(Cytochrome_B)_(Cytochrom_B_C)	1	29	67	30	81	10	1601	100	87	97
(Cytochrom_C1);(UCR_14kD)	1	23	56	26	72	34	399	100	91	88
(Cytochrom_C1);(UCR_hinge)	1	27	60	27	73	30	1082	100	85	100
(Cytochrom_C1);(UCR_UQCRX_QCR9)	1	24	57	27	73	32	841	100	89	89
(Cytochrom_C1);(UcrQ)	1	27	61	27	73	21	726	100	84	100
(Cytochrome_B)_(Cytochrom_B_C);(Peptidase_M16)_(Peptidase_M1 6_C)	1	22	55	26	72	26	401	100	91	85
(Cytochrome_B)_(Cytochrom_B_C);(UCR_14kD)	1	27	61	27	73	34	1193	100	84	100
(Cytochrome_B)_(Cytochrom_B_C);(UcrQ)	1	27	60	27	73	21	990	100	85	100
(Peptidase_M16)_(Peptidase_M16_C);(UcrQ)	1	27	61	27	73	21	825	100	84	100
(UCR_14kD);(UcrQ)	1	23	56	26	72	21	464	100	91	88
(KOW)_(Ribosomal_L27e);(Ribosomal_L34e)	1	96	110	98	112	10	661	34	10	98
(KOW)_(Ribosomal_L27e);(Ribosomal_L7Ae)	1	95	109	97	111	3	512	33	10	98
(KOW)_(Ribosomal_L27e);(Ribosomal_L7Ae)	2	85	99	97	111	10	279	32	10	88
(Ribosomal_L15e);(Ribosomal_L36e)	1	98	112	98	112	10	530	36	11	100
(Ribosomal_L18);(Ribosomal_L28e)	1	42	42	42	42	10	231	33	2	100
(Ribosomal_L18);(Ribosomal_L30_N)_(Ribosomal_L30)	1	81	95	91	105	10	261	33	9	89
(Ribosomal_L18A);(Ribosomal_L30_N)_(Ribosomal_L30)	1	97	111	100	114	1	463	35	11	97
(Ribosomal_L21e);(Ribosomal_L30_N)_(Ribosomal_L30)	1	95	109	95	109	7	593	34	10	100
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L39)	1	83	97	88	102	10	223	35	10	94
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L7Ae)	1	88	102	88	102	7	372	32	10	100
(Ribosomal_L27A);(Ribosomal_L36e)	1	77	91	80	94	10	232	31	9	96
(Ribosomal_L28e);(Ribosomal_L32e)	1	41	41	46	46	10	768	37	0	89
(Ribosomal_L28e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	28	28	29	29	10	532	29	0	97
(Ribosomal_L32e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	28	28	29	29	83	226	29	0	97
(Ribosomal_L35Ae);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	23	23	33	33	10	857	30	0	70
(Ribosomal_L36e);(Ribosomal_L7Ae)	1	96	110	96	110	9	308	35	11	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L6e)	1	54	68	54	68	36	491	34	16	100
(Ribosomal_L13e);(Ribosomal_L15e)	1	97	111	97	111	10	513	35	11	100
(Ribosomal_L13e);(Ribosomal_L18)	1	74	88	78	92	10	234	31	10	95
(Ribosomal_L13e);(Ribosomal_L27A)	1	97	111	97	111	10	1471	35	10	100
(Ribosomal_L13e);(Ribosomal_L29)	1	102	116	102	116	3	892	40	10	100
(Ribosomal_L13e);(Ribosomal_L36e)	1	93	107	93	107	10	645	33	10	100
(Ribosomal_L13e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	50	50	53	53	10	227	34	8	94
(Ribosomal_L15e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	95	109	97	111	5	269	36	11	98
(Ribosomal_L18);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	99	113	101	115	10	1116	36	11	98
(Ribosomal_L18A);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	49	63	52	66	37	238	35	16	94
(Ribosomal_L26)_(KOW)_(Ribosomal_L26);(Ribosomal_L4)_(Ribos_ L4_asso_C)	1	23	23	27	27	47	222	30	9	85
(Ribosomal_L30_N)_(Ribosomal_L30);(Ribosomal_L4)_(Ribos_L4_a sso_C)	1	95	109	95	109	10	1047	35	11	100
(Ribosomal_L32e);(Ribosomal_L6e)	1	47	61	47	61	78	528	30	16	100
(Ribosomal_L35Ae);(Ribosomal_L6e)	1	57	71	57	71	39	858	37	15	100
(MHC_I)_(Ig_3);(V-set)_(DUF1968)	1	43	73	58	94	37	419	100	56	74
(C1-set);(MHC_I_3)_(Ig_3)	1	23	36	23	36	23	1237	100	97	100
(Ribosomal_L21e);(Ribosomal_L29e)	1	92	106	92	106	10	475	31	8	100
(KH_2)_(Ribosomal_S3_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	20	34	24	38	75	802	18	6	83
(Ribosomal_L5)_(Ribosomal_L5_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	20	34	24	38	75	567	18	6	83
(Ribosomal_S13);(Stm1_N)_(HABP4_PAI-RBP1)	1	20	34	24	38	75	529	18	6	83
(Ribosomal_S19);(Stm1_N)_(HABP4_PAI-RBP1)	1	20	34	24	38	75	418	18	6	83
(Ribosomal_L28e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	41	41	43	43	10	930	32	0	95
(Ribosomal_L4)_(Ribos_L4_asso_C);(Ribosomal_L6e_N)_(Ribosoma l_L6e)	1	27	27	28	28	10	351	30	0	96