PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7X9E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	69.2	H1	13	H1-13-1	10	EASGFSFKDYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	50.0	H2	10	H2-10-2	9	RISGDTRGTS	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	33.3	H3	14	H3-14-*	-1	AALVIVAAGDDFDL	BBBBABALLBABBB
A	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	87.5	H4	8	H4-8-1	11	RDNSRNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	71.4	L1	14	L1-14-2	8	TGSSSDIGSyNFVS	BBBAAAAAABABBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	75.0	L2	8	L2-8-1	13	YEVNKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	44.4	L3	10	L3-10-*	-1	CSYGGRNNLI	BBBALBLBBB
B	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	69.2	H1	13	H1-13-1	11	EASGFSFKDYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	50.0	H2	10	H2-10-2	10	RISGDTRGTS	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	33.3	H3	14	H3-14-*	-1	AALVIVAAGDDFDL	BBBBABBBLBABBB
C	heavy	Homo.sapiens	Hu_IGHV3-43*02	87.7	Hu_IGHV3-43*02	87.5	H4	8	H4-8-1	8	RDNSRNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	71.4	L1	14	L1-14-2	10	TGSSSDIGSyNFVS	BBBAAAAAABBBBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	75.0	L2	8	L2-8-1	14	YEVNKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	44.4	L3	10	L3-10-*	-1	CSYGGRNNLI	BBBALBLBBB
D	lambda	Homo.sapiens	Hu_IGLV2-11*01	89.7	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024