PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7X6A

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	46.2	H1	13	H1-13-*	-1	DTSGHSFTSNAIH	BAAABBBBBABBB
G	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	80.0	H2	10	H2-10-3	22	WINTDTGTPT	BBBBLALBBB
G	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	100.0	H3	13	H3-13-*	-1	ARERDYSDYFFDY	BBBABBLBABBAB
G	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	75.0	H4	8	H4-8-*	-1	LDTSARTA	BBAALABB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	46.2	H1	13	H1-13-*	-1	DTSGHSFTSNAIH	BAAABBBBBABBB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	80.0	H2	10	H2-10-3	21	WINTDTGTPT	BBBBLALBBB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	100.0	H3	13	H3-13-*	-1	ARERDYSDYFFDY	BBBABBLBABBAB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	75.0	H4	8	H4-8-*	-1	LDTSARTA	BBAALABB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	46.2	H1	13	H1-13-*	-1	DTSGHSFTSNAIH	BAAABBBBBABBB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	80.0	H2	10	H2-10-3	21	WINTDTGTPT	BBBBLALBBB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	100.0	H3	13	H3-13-*	-1	ARERDYSDYFFDY	BBBABBLBABBAB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	91.7	Hu_IGHV7-4-1*02	75.0	H4	8	H4-8-*	-1	LDTSARTA	BBAALABB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	CDRLenMismatch	-1.0	L1	13	L1-13-*	-1	RAraSLGISTDLA	BBBBAAEALLBBB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L2	8	L2-8-4	18	YGASTRAT	BEAABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	85.7	L3	9	L3-9-*	-1	QQYSNWPLT	BBBABABBB
J	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	16	GSGTEF	EBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	CDRLenMismatch	-1.0	L1	13	L1-13-*	-1	RAraSLGISTDLA	BBBBAAEALLBBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L2	8	L2-8-4	24	YGASTRAT	BEAABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	85.7	L3	9	L3-9-2	29	QQYSNWPLT	BBBABABBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	12	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	CDRLenMismatch	-1.0	L1	13	L1-13-*	-1	RAraSLGISTDLA	BBBBAAEALLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L2	8	L2-8-4	19	YGASTRAT	BEAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	85.7	L3	9	L3-9-2	27	QQYSNWPLT	BBBABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	94.2	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	13	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024