PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SHU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	CDRLenMismatch	-1.0	H1	14	H1-14-1	10	AVSGYNITSgYSWN	BBBLBBAAAEEBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	CDRLenMismatch	-1.0	H2	9	H2-9-1	8	SVTYDGSTN	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	Hu_IGHV3-30*02	100.0	H3	14	H3-14-2	11	AKGNNYFGHWHFAV	BBBBBBLLBBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	7	RDGSKNTF	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	CDRLenMismatch	-1.0	L1	15	L1-15-1	10	RASKSVDsdgdSYMN	BBABBABBLLBBBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	13	YAASYLES	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	57.1	L3	9	L3-9-cis7-1	5	QQSHEDPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	CDRLenMismatch	-1.0	H1	14	H1-14-1	8	AVSGYNITSgYSWN	BBBLBBAAAEEBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	CDRLenMismatch	-1.0	H2	9	H2-9-1	6	SVTYDGSTN	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	Hu_IGHV3-30*02	100.0	H3	14	H3-14-2	11	AKGNNYFGHWHFAV	BBBBBBLLBBBBAB
E	heavy	Homo.sapiens	Hu_IGHV3-30*02	86.3	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	5	RDGSKNTF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	CDRLenMismatch	-1.0	L1	15	L1-15-1	10	RASKSVDsdgdSYMN	BBABBABBLLBBBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	13	YAASYLES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	57.1	L3	9	L3-9-cis7-1	7	QQSHEDPYT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on July 15, 2024